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Definately the DVDs! I just got a writer this xmas and boy does it make a difference when you have a LOT to back up! And like previously stated, verify the data. Also finalize the DVD, which is an option with R/RWs etc. Also make at least two copies and send one set to a safe place away from your home/external hd/ect. I sent one set to my Mom's house for safe keeping, just in case we ever have a fire or they get lost in a move. I think I actually read the opposite of what you did, anyway, I've heard DVDs are more stable. But I also think it depends on the brand used etc as well.
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